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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791258.1_cds_XP_016506242.1_1876
CDS Infomation

[gene=LOC107824030] [db_xref=GeneID:107824030] [protein=phytoene synthase 2, chloroplastic-like] [protein_id=XP_016506242.1] [location=join(4569..4896,5278..5328,5715..5887,5986..6221,6308..6500,7414..7578)] [gbkey=CDS]
Sequence

ATGTGTCCAACAATACTTCCTTATTCAGCCAATTCTTGCCTTAGAGCAGGAAATAGAAGA
TTTTCATCTAAAAAATGCAGAGGAAAATTACCTATAAGAGCTGAAGTTCTTACAGTTGCA
CCTAAGAAGAAGGGACAAAGTAAAATCCATGAATTATCAGTACAAGGAATTGCTCACACT
CATCAACGCGTTCGCGAAGTTGTGTGGAGGCAAACACATGTTACAAATGATTGTTATAGA
AAGCCAAGTTTTGATCCTATGTTTCTTGATGAAGCTTATGAATTATGCAGAAAAATTTGT
GCAGAATGTGCTAAAACTTTTTACTTAGGAACTAAACTGATGACTCCAGAGAGACAAAAA
GCAATATGGGCTATCTATGTATGGTGCAGAAGGACAGATGAACTTGTCGATGGACCTAAT
GCCGATTACATGAACAACACTGTTCTTGATGGATGGGAAGAAAGATTAGAAGACATTTTC
AACTGCAGACCTTATGATATTCTTGATTCTGCTTTAACTGATACCATTTCCAACTTCCCC
TTAGATATCAAGCCATTCAAGGACATGATAGAGGGAATGAGAATGGATACGAGGAAAAGC
CGATATGCAAATTTCCAGGAACTATATATGTACTGCTACTGTGTGGCTGGAACAGTGGGA
CTAATGAGTGTACCAGTAATGGGAATTGCACCAGAATCTCCAGTTTCAGCTCAATCTGTA
TATAATTCAGCACTTCATTTGGGCATAGGGAATCAACTAACTAACATTCTCAGAGATGTT
GGAGAAGATGCATTGAGAGGAAGAGTTTATCTGCCACAAGATGAACTAGCACAGTATGGA
TTATGTGACGAAGACGTGTTCTCGAGGAAAGTCACTAATCAATGGAGGGAATTCATGAAG
GAACAGATCAGTAGGGCAAGATTCTACTTCAACTTGGCTGAGGAGGGTGCTTCTCATCTT
AACAAAGCTAGCCGTTGGCCTGTTTGGTCATCCTTAATTTTGTACAGGAAAATTTTGGAT
GCAATAGAGGAAAATGATTATGATAACTTAACAAAGAGAGCTTATGTTGGGAGGGCCAAA
AAGTTGGTAACTTTACCTGTTTCATATGCTAGAGCTTTATCTGTGCCAAGTTTGGCCATT
CAATAG

Peptide Sequence

PEP ID

XP_016506242.1
PEP Infomation

PREDICTED: phytoene synthase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MCPTILPYSANSCLRAGNRRFSSKKCRGKLPIRAEVLTVAPKKKGQSKIHELSVQGIAHT
HQRVREVVWRQTHVTNDCYRKPSFDPMFLDEAYELCRKICAECAKTFYLGTKLMTPERQK
AIWAIYVWCRRTDELVDGPNADYMNNTVLDGWEERLEDIFNCRPYDILDSALTDTISNFP
LDIKPFKDMIEGMRMDTRKSRYANFQELYMYCYCVAGTVGLMSVPVMGIAPESPVSAQSV
YNSALHLGIGNQLTNILRDVGEDALRGRVYLPQDELAQYGLCDEDVFSRKVTNQWREFMK
EQISRARFYFNLAEEGASHLNKASRWPVWSSLILYRKILDAIEENDYDNLTKRAYVGRAK
KLVTLPVSYARALSVPSLAIQ

Transcript Sequence

Gene sequence data has not been registered.